Publications in the NUM

Granai M, Warm V, Vogelsberg A, Milla J, Greif K, Vogel U, Bakchoul T, Rosenberger P, Quintanilla-Martinez L, Schürch C, Klingel K, Fend F, Bösmüller H. Impact of P-selectin-PSGL-1 Axis on Platelet-Endothelium-Leucocyte Interactions in Fatal COVID-19. Laboratory Investigation; a Journal of Technical Methods and Pathology. 2023 May; 100179.      [DOI]      [File] 

Liu Z, Hollmann C, Kalanidhi S, Grothey A, Keating S, Mena-Palomo I, Lamer S, Schlosser A, Kaiping A, Scheller C, Sotzny F, Horn A, Nürnberger C, Cejka V, Bahmer T, Schreiber S, Vehreschild JJ, Miljukov O, Schäfer C, Kretzler L, Keil T, Reese J, Eichner FA, Schmidbauer L, Heuschmann PU, Störk S, Morbach C, Riemekasten G, Beyersdorf N, Scheibenbogen C, Naviaux RK, Williams M, Ariza ME, Prusty BK. Increased circulating fibronectin, depletion of natural IgM and heightened EBV, HSV-1 reactivation in ME/CFS and long COVID. medRxiv. 2023 Jun.; Online ahead of print      [DOI]  [Pubmed] 

J K, ZA R, NL B, TA A, LK S, C P, T P, U F, D G. Intermittent body composition analysis as monitoring tool for muscle wasting in critically ill COVID-19 patients.. Annals of intensive care. 2023 Jul.;      [DOI] 

Lichtner G, Haese T, Brose S, Röhrig L, Lysyakova L, Rudolph S, Uebe M, Sass J, Bartschke A, Hillus D, Kurth F, Sander LE, Eckart F, Toepfner N, Berner R, Frey A, Dörr M, Vehreschild JJ, Kalle C, Thun S. Interoperable, domain-specific extensions for the German Corona Consensus (GECCO) COVID-19 research data set using an interdisciplinary, consensus-based workflow: Data set development study. JMIR Med. Inform.. 2023 Jul.; 11e45496.      [DOI]  [Pubmed] 

AA D, A J, E F, TJ V, J D, AM B. Lightweight Techniques to Improve Generalization and Robustness of U-Net Based Networks for Pulmonary Lobe Segmentation.. Bioengineering (Basel, Switzerland). 2023 Dec.;      [DOI] 

F K, JN K, G M, T W, T H, S TA, K H, K B, C H, J S, Kuhl C, S N, D T. Medical transformer for multimodal survival prediction in intensive care: integration of imaging and non-imaging data.. Scientific reports. 2023 Jul.;      [DOI] 

Baumgärtner G, CA H, Schulze-Weddige S, R R, NL B, M R, F D, KP F, H P, J L, F B, T P. Metadata-independent classification of MRI sequences using convolutional neural networks: Successful application to prostate MRI.. European journal of radiology. 2023 Sep.;      [DOI] 

Azeke AT, Schädler J, Ondruschka B, Steurer S, Möbius D, Fitzek A. Minimally Invasive Tissue Sampling via Post Mortem Ultrasound: A Feasible Tool (Not Only) in Infectious Diseases-A Case Report. Diagnostics (Basel, Switzerland). 2023 Aug.; 13(16):2643.      [DOI]      [File] 

J K, P F, S G, RJ G, J B, M R, M W, R S, D M, T P. Morphological appearance of the B.1.1.7 mutation of the novel coronavirus 2 (SARS-CoV-2) in chest CT.. Quantitative imaging in medicine and surgery. 2023 Feb.;      [DOI] 

Heinrich F, Huter T, Mertens S, Lange P, Vering J, Heinemann A, Nörz DS, Hoffmann A, Ondruschka B, Krasemann S, Lütgehetmann M. New Postmortem Perspective on Emerging SARS-CoV-2 Variants of Concern, Germany. Emerging Infectious Diseases. 2023 Mar.; 29(3):652—656.      [DOI] 

J N, F S, A D, S E, F M, D D, L V, E V, H C, MFH B, BH A, PB S, M P, U J, G B, T P, J F, A P, U H, A M. Non-contrast computed tomography features predict intraventricular hemorrhage growth.. European radiology. 2023 Nov.;      [DOI] 

Hoffmann M, Wong L, Arora P, Zhang L, Rocha C, Odle A, Nehlmeier I, Kempf A, Richter A, Halwe N, Schön J, Ulrich L, Hoffmann D, Beer M, Drosten C, Perlman S, Pöhlmann S. Omicron subvariant BA.5 efficiently infects lung cells. Nature communications. 2023; 14(1):3500.      [DOI] 

Hoffmann M, Wong LR, Arora P, Zhang L, Rocha C, Odle A, Nehlmeier I, Kempf A, Richter A, Halwe NJ, Schoen J, Ulrich L, Hoffmann D, Beer M, Drosten C, Perlman S, Poehlmann S. Omicron subvariant BA.5 efficiently infects lung cells. Nature Communications. 2023;      [DOI]      [File] 

Shi Y, Strobl R, Apfelbacher C, Bahmer T, Geisler R, Heuschmann P, Horn A, Hoven H, Keil T, Krawczak M, Krist L, Lemhöfer C, Lieb W, Lorenz-Depiereux B, Mikolajczyk R, Montellano FA, Reese JP, Schreiber S, Skoetz N, Störk S, Vehreschild JJ, Witzenrath M, Grill E, NAPKON Study Group . Persistent symptoms and risk factors predicting prolonged time to symptom-free after SARS‑CoV‑2 infection: an analysis of the baseline examination of the German COVIDOM/NAPKON-POP cohort. Infection. 2023 May; 51(6):1679–1694.      [DOI]  [Pubmed] 

Winkelmann S, Korth A, Voss B, Nasr MA, Behrend N, Pudszuhn A, Hofmann VM, Schendzielorz P, Maetzler C, Hermes A, Borzikowsky C, Bahmer T, Lieb W, Schreiber S, Störk S, Montellano FA, Witzenrath M, Keil T, Krawczak M, Laudien M, On Behalf Of The Napkon Study Group . Persisting chemosensory dysfunction in COVID-19 - a cross-sectional population-based survey. Rhinology. 2023 Feb.; 61(1):12—23.      [DOI] 

P F, F F, M R, M W, J K, R R, D Z, E C, D M, N G, T P. Physiological iodine uptake of the spine's bone marrow in dual-energy computed tomography - using artificial intelligence to define reference values based on 678 CT examinations of 189 individuals.. Frontiers in endocrinology. 2023;      [DOI] 

A S, H K, G B, M P, M O, MR O, F A, Erdemir A, E H, Ö Y, E I, E C, M C, M D, İ K, Ç O, A S, A W, M P. Prognostic Role of the Pectoralis Musculature in Patients with COVID-19. A Multicenter Study.. Academic radiology. 2023 Jan.;      [DOI] 

Lutter M, Kniep I, Ondruschka B, Heinemann A. Pulmonale Befunde in der postmortalen Computertomographie bei COVID-19-assoziierten Todesfällen. Rechtsmedizin. 2023 Dec.; 3417—23.      [DOI]      [File] 

U E, SM B, SA S, F F, P K, L P, B G, S S, T S, H K, Beer M, C K. Quantitative Evaluation of COVID-19 Pneumonia CT Using AI Analysis-Feasibility and Differentiation from Other Common Pneumonia Forms.. Diagnostics (Basel, Switzerland). 2023 Jun.;      [DOI] 

CS L, S M, D W, CG L, SA S, Beer M, W T, C B, F Z, M G. Radiomics and Clinicopathological Characteristics for Predicting Lymph Node Metastasis in Testicular Cancer.. Cancers. 2023 Nov.;      [DOI] 

G E, AL O, A S, C M, Holzwarth S, A S, Lange B, Karch A, A P, H S, S B, C H, H S, R , R B, J L, F B, N T. SARS-CoV-2 sero-immunity and quality of life in children and adolescents in relation to infections and vaccinations: the IMMUNEBRIDGE KIDS cross-sectional study, 2022.. Infection. 2023 Oct.;      [DOI] 

D W, T P, CS L, CG L, Beer M, M G, T R. Self-supervised pre-training with contrastive and masked autoencoder methods for dealing with small datasets in deep learning for medical imaging.. Scientific reports. 2023 Nov.;      [DOI] 

Thibeault C, Bardtke L, Vanshylla K, Cristanziano V, Eberhardt KA, Stubbemann P, Hillus D, Tober-Lau P, Mukherjee P, Münn F, Lippert LJ, Helbig ET, Lingscheid T, Steinbeis F, Mittermaier M, Witzenrath M, Zoller T, Group P, Klein F, Sander LE, Kurth F. Short- and long-term T cell and antibody responses following dexamethasone treatment in COVID-19. JCI Insight. 2023 Apr.; 8(8):      [DOI]  [Pubmed] 

J L, C G, A P, D S, J K, J E. Sparse convolutional neural network for high-resolution skull shape completion and shape super-resolution.. Scientific reports. 2023 Nov.;      [DOI] 

Miederer I, Rogasch JMM, Fischer R, Fuchs T, Lapa C, Lohmann P, Shi K, Tran-Gia J, Wendler T, Hellwig D. The Medical Informatics Initiative and the Network University Medicine - Perspectives for Nuclear Medicine. Nuklearmedizin. 2023; 62(5):276—283.      [DOI]  [Weblink] 

K G, S F, D K, F S, T G, D W. The Status of Data Management Practices Across German Medical Data Integration Centers: Mixed Methods Study.. Journal of medical Internet research. 2023 Nov.;      [DOI] 

Lücke J, Nawrocki M, Schnell J, Meins N, Heinrich F, Zhang T, Bertram F, Sabihi M, Böttcher M, Blankenburg T, Pfaff M, Notz S, Kempski J, Reeh M, Wolter S, Mann O, Izbicki JR, Lütgehetmann M, Duprée A, Giannou AD, Ondruschka B, Huber S. TNFα aggravates detrimental effects of SARS-CoV-2 infection in the liver. Frontiers in Immunology. 2023; 141151937.      [DOI] 

P T, L L, C K, D B, Liebold A, Beer M, HA K. Unsupervised domain adaptation for the detection of cardiomegaly in cross-domain chest X-ray images.. Frontiers in artificial intelligence. 2023;      [DOI] 

Woo MS, Shafiq M, Fitzek A, Dottermusch M, Mohammadi B, Mayer C, Bal LC, Raich L, Matschke J, Krasemann S, Pfefferle S, Brehm TT, Lütgehetmann M, Schädler J, Wiesch J, Ondruschka B, Friese MA, Glatzel M. Vagus nerve inflammation contributes to dysautonomia in COVID-19. Acta Neuropathologica. 2023 Sep.; 146(3):387—394.      [DOI]      [File] 

A S, M T, C B, A W, J B. Validation of clinical-radiological scores for prognosis of mortality in acute pulmonary embolism.. Respiratory research. 2023 Aug.;      [DOI] 

A S, M T, H K, M H, J O, E C, M C, M D, İ K, Ç O, Ö Y, E H, E I, H Ö, H E, O C, H S, KA G, M P, A W. Visceral to subcutaneous fat ratio predicts short-term mortality in patients with Covid 19. A multicenter study.. The British journal of radiology. 2023 Mar.;      [DOI] 

Mieling R, Neidhardt M, Latus S, Stapper C, Gerlach S, Kniep I, Heinemann A, Ondruschka B, Schlaefer A. Collaborative Robotic Biopsy with Trajectory Guidance and Needle Tip Force Feedback. In: 2023 IEEE International Conference on Robotics and Automation (ICRA). 2023 May. p. 6893—6900.      [DOI] 

AM K, M B, A B, D F, J H, C L, J S, W H, S. S. Leadership is replaced by participation in Pandemic Preparedness: A rapid review of the existing evidence on recommended approaches in crises.. In: 7th International Conference on Prevention & Infection Control (ICPIC), Geneva, Switzerland.. 2023.      [DOI]      [File] 

Triefenbach L, Otto R, Bienzeisler J, Kombeiz A, Ehrentreich S, Röhrig R, Majeed RW. Establishing a data quality baseline in the AKTIN Emergency Department Data Registry – A secondary use perspective. Stud Health Technol Inform.. 2022 May 25; 294(25):209-213.      [DOI]  [Pubmed] 

Wang Z, Cryar A, Lemke O, Tober-Lau P, Ludwig D, Helbig E, Hippenstiel S, Sander L, Blake D, Lane C, Stahl D. A multiplex protein panel assay for severity prediction and outcome prognosis in patients with COVID-19: An observational multi-cohort study. EClinicalMedicine. 2022; 49101495.      [DOI] 

Demichev V, et al . A proteomic survival predictor for COVID-19 patients in intensive care. PLOS Digital Health. 2022; 1e0000007.      [DOI] 

Würstle S, Erber J, Hanselmann M, Stahl D. A telemedicine-guided self-collection approach for PCR-based SARS-CoV-2 testing: Comparative study. JMIR Formative Research. 2022; 6(1):      [DOI]      [File] 

Wygrecka M, Birnhuber A, Seeliger B, Michalick L, Pak O, Schultz A, Schramm F, Zacharias M, Gorkiewicz G, David S, Welte T, Schmidt J, Weissmann N, Schermuly R, Barreto G, Schaefer L, Markart P, Brack M, Hippenstiel S, Kurth F, Sander L, Witzenrath M, Kuebler W, Kwapiszewska G, Preissner K. Altered fibrin clot structure and dysregulated fibrinolysis contribute to thrombosis risk in severe COVID-19. Blood Adv. 2022; 6(3):1074—1087.      [DOI] 

Gagiannis D, Umathum VG, Bloch W, Rother C, Stahl M, Witte HM, Djudjaj S, Boor P, Steinestel K. Antemortem vs Postmortem Histopathologic and Ultrastructural Findings in Paired Transbronchial Biopsy Specimens and Lung Autopsy Samples From Three Patients With Confirmed SARS-CoV-2. American Journal of Clinical Pathology. 2022 Jan.; 157(1):54—63.      [DOI]      [File] 

Krasemann S, Dittmayer C, Stillfried S, Meinhardt J, Heinrich F, Hartmann K, Pfefferle S, Thies E, Manitius R, Aschman TAD, Radke J, Osterloh A, Schmid S, Buhl E, Ihlow J, Dubois F, Arnhold V, Elezkurtaj S, Horst D, Hocke A, Timm S, Bachmann S, Corman V, Goebel H, Matschke J, Stanelle-Bertram S, Gabriel G, Seilhean D, Ondruschka B, Ochs M, Stenzel W, Heppner FL, Boor P, Radbruch H, Laue M, Glatzel M. Assessing and improving the validity of COVID-19 autopsy studies - A multicentre approach to establish essential standards for immunohistochemical and ultrastructural analyses. EBioMedicine. 2022 Sep.; 83104193.      [DOI] 

P F, F F, A J, M R, M W, P P, J K, H C, S L, D M, R S, T P. Assessment of COVID-19 lung involvement on computed tomography by deep-learning-, threshold-, and human reader-based approaches-an international, multi-center comparative study.. Quantitative imaging in medicine and surgery. 2022 Nov.;      [DOI] 

Buhr L, Schicktanz S, Nordmeyer E. Attitudes Toward Mobile Apps for Pandemic Research Among Smartphone Users in Germany: National Survey. JMIR Mhealth Uhealth. 2022; 10(1):e31857.      [DOI] 

Schulz S, et al . Augmented Neutralization of SARS-CoV-2 Omicron Variant by Boost Vaccination and Monoclonal Antibodies. European journal of immunology. 2022;      [DOI] 

Schmid B, Griesel M, Fischer A, Romero CS, Metzendorf M, Weibel S, Fichtner F. Awake Prone Positioning, High-Flow Nasal Oxygen and Non-Invasive Ventilation as Non-Invasive Respiratory Strategies in COVID-19 Acute Respiratory Failure: A Systematic Review and Meta-Analysis. J Clin Med. 2022; 11(2):391.      [DOI] 

Demleitner AF, Wolff A, Erber J, et al . Best practice approaches to outpatient management of people living with Parkinson's disease during the COVID-19 pandemic. J Neural Transm (Vienna). 2022; 129(11):1377-1385.      [DOI] 

Lingscheid T, Lippert L, Hillus D, Kruis T, Thibeault C, Helbig E, Tober-Lau P, Pfäfflin F, Müller-Redetzky H, Witzenrath M, Zoller T, Uhrig A, Opitz B, Suttorp N, Kramer T, Sander L, Stegemann M, Kurth F. Characterization of antimicrobial use and co-infections among hospitalized patients with COVID-19: a prospective observational cohort study. Infection. 2022; 50(6):1441—1452.      [DOI] 

Walker A, Houwaart T, Finzer P, Ehlkes L, Tyshaieva A, Damagnez M, Strelow D, Duplessis A, Nicolai J, Wienemann T, Tamayo T, Kohns Vasconcelos M, Hülse L, Hoffmann K, Lübke N, Hauka S, Däumer M, Thielen A, Kolbe-Busch S, Göbels K, Zotz R, Pfeffer K, Timm J, Dilthey A. Characterization of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection Clusters Based on Integrated Genomic Surveillance, Outbreak Analysis and Contact Tracing in an Urban Setting. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 2022; 74(6):1039—1046.      [DOI] 

Dulovic A, et al . Comparative Magnitude and Persistence of Humoral SARS-CoV-2 Vaccination Responses in the Adult Population in Germany. Frontiers in Immunology. 2022; 13828053.      [DOI] 

Georg P, Astaburuaga-García R, Bonaguro L, Brumhard S, Michalick L, Lippert ea. Complement activation induces excessive T cell cytotoxicity in severe COVID-19. Cell. 2022; 185493—512.e425.

Brandner J, Boor P, Borcherding L, et al . Contamination of personal protective equipment during COVID-19 autopsies. Virchows Arch. 2022; 1-10.      [DOI]